Description
ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:20065]
Gene Synonyms
FLJ40511, MGC10702
Location
Chromosome 12: 109,460,894-109,525,831 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 10 transcripts (splice variants), 196 orthologues and 71 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000257548.5 | USP30-001 | 3742 | 517aa | ENSP00000257548.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9123 | B3KUS5 F5H8D3 Q70CQ3 S4R3D1 | NM_032663.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000392784.2 | USP30-002 | 2483 | 486aa | ENSP00000376535.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KUS5 F5H8D3 S4R3D1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000536723.1 | USP30-010 | 826 | 177aa | ENSP00000443678.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H8D3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539121.1 | USP30-009 | 534 | 95aa | ENSP00000440837.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXG2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000536393.1 | USP30-008 | 476 | 146aa | ENSP00000438829.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H3L3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000377883.3 | USP30-004 | 805 | 35aa | ENSP00000473942.1 | Nonsense mediated decay | S4R354 | - | - | |
| ENST00000470117.2 | USP30-006 | 615 | 91aa | ENSP00000474166.1 | Nonsense mediated decay | S4R3D1 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000479219.1 | USP30-003 | 2906 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000491362.1 | USP30-005 | 745 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000467307.1 | USP30-007 | 569 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
