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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: C12orf39 ENSG00000134548

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Description

chromosome 12 open reading frame 39 [Source:HGNC Symbol;Acc:28139]

Gene Synonyms

MGC10946, NPQ, spexin

Location

Chromosome 12: 21,679,241-21,690,311 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 7 transcripts (splice variants) and 180 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256969.2	C12orf39-001	1845	116aa	ENSP00000256969.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31757	Q9BT56	NM_030572.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000546199.1	C12orf39-004	554	36aa	ENSP00000440877.1	Nonsense mediated decay		F5GXE5	-	-
ENST00000543800.1	C12orf39-003	1687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537527.1	C12orf39-007	803	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000544637.1	C12orf39-006	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000535139.1	C12orf39-002	1826	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000535033.1	C12orf39-005	1683	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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