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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CNTN6 ENSG00000134115

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Description

contactin 6 [Source:HGNC Symbol;Acc:2176]

Gene Synonyms

NB-3, NB3

Location

Chromosome 3: 1,134,260-1,445,901 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 7 transcripts (splice variants) and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000446702.2	CNTN6-001	4513	1028aa	ENSP00000407822.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2557	F5H752 Q9UQ52	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350110.2	CNTN6-004	3814	1028aa	ENSP00000341882.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2557	F5H752 Q9UQ52	NM_014461.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539053.1	CNTN6-201	3519	956aa	ENSP00000442791.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H752	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397479.2	CNTN6-002	3519	63aa	ENSP00000380616.2	Nonsense mediated decay		F8VWS7	-	-
ENST00000394261.2	CNTN6-003	1433	41aa	ENSP00000377804.2	Nonsense mediated decay		F8WDQ0	-	-
ENST00000413210.1	CNTN6-005	551	63aa	ENSP00000408460.1	Nonsense mediated decay		F8VWS7	-	-
ENST00000485257.1	CNTN6-006	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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