Description
protein tyrosine phosphatase, receptor type, E [Source:HGNC Symbol;Acc:9669]
Gene Synonyms
HPTPE, PTPE, R-PTP-EPSILON
Location
Chromosome 10: 129,705,325-129,884,119 forward strand.
GRCh37:CM000672.1
About this gene
This gene has 13 transcripts (splice variants), 273 orthologues and 35 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000254667.3 | PTPRE-003 | 5331 | 700aa | ENSP00000254667.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7657 | P23469 Q5VWH5 Q5VWH6 Q69YS2 Q96P81 | NM_006504.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000306042.5 | PTPRE-004 | 4957 | 642aa | ENSP00000303350.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7658 | P23469 Q69YS2 | NM_130435.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000455661.1 | PTPRE-006 | 2304 | 153aa | ENSP00000416939.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5VWH5 Q5VWH6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000419012.2 | PTPRE-201 | 2293 | 700aa | ENSP00000402337.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7657 | P23469 Q5VWH5 Q5VWH6 Q69YS2 Q96P81 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000430713.2 | PTPRE-202 | 928 | 145aa | ENSP00000413930.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DRZ3 Q5VWH6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000442830.1 | PTPRE-007 | 779 | 140aa | ENSP00000410540.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5VWH6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000471218.1 | PTPRE-008 | 522 | 149aa | ENSP00000474102.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | S4R3B0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000467366.1 | PTPRE-010 | 338 | 107aa | ENSP00000474830.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | S4R3X3 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000479896.1 | PTPRE-005 | 5736 | 536aa | ENSP00000473761.1 | Nonsense mediated decay | Q69YS2 S4R2Y5 | - | - | |
| ENST00000495530.1 | PTPRE-009 | 987 | 118aa | ENSP00000475063.1 | Nonsense mediated decay | S4R448 | - | - | |
| ENST00000463727.1 | PTPRE-001 | 3944 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000492479.1 | PTPRE-011 | 866 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000487428.1 | PTPRE-002 | 325 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
