Description
tripartite motif containing 22 [Source:HGNC Symbol;Acc:16379]
Gene Synonyms
GPSTAF50, RNF94, STAF50
Location
Chromosome 11: 5,710,919-5,758,319 forward strand.
GRCh37:CM000673.1
About this gene
This gene has 11 transcripts (splice variants), 40 orthologues and 80 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000379965.3 | TRIM22-001 | 2989 | 498aa | ENSP00000369299.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41612 | C9J060 C9JIU5 Q8IYM9 | NM_006074.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000444844.1 | TRIM22-011 | 1244 | 38aa | ENSP00000404204.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000429063.1 | TRIM22-010 | 1241 | 37aa | ENSP00000409991.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000454828.1 | TRIM22-006 | 1002 | 305aa | ENSP00000393250.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JWC5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000414641.1 | TRIM22-005 | 897 | 227aa | ENSP00000396849.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J060 C9JIU5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000425490.1 | TRIM22-003 | 812 | 203aa | ENSP00000400417.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J060 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000450670.1 | TRIM22-008 | 508 | 63aa | ENSP00000406412.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C2K0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000414897.1 | TRIM22-007 | 655 | 143aa | ENSP00000388994.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000480395.1 | TRIM22-002 | 2008 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460454.1 | TRIM22-004 | 926 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000493494.1 | TRIM22-009 | 460 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
