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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RFTN1 ENSG00000131378

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Description

raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:30278]

Gene Synonyms

FLJ23866, KIAA0084, MIG2, PIB10, PIG9, RAFTLIN, Raftlin

Location

Chromosome 3: 16,355,081-16,555,533 reverse strand.

GRCh37:CM000665.1

About this gene

This gene has 12 transcripts (splice variants), 293 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334133.4	RFTN1-001	2982	578aa	ENSP00000334153.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33712	B4E1H7 C9JHG2 C9JRN3 C9JWQ9 Q14699	NM_015150.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000432519.1	RFTN1-002	2695	542aa	ENSP00000403926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E1H7 G3XAJ6 Q8N5I0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000451036.1	RFTN1-006	1137	275aa	ENSP00000403997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHG2 C9JRN3 C9JWQ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441460.1	RFTN1-007	599	149aa	ENSP00000388718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRN3 C9JWQ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449415.1	RFTN1-008	578	149aa	ENSP00000409427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRN3 C9JWQ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000431547.1	RFTN1-005	555	114aa	ENSP00000393216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWQ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000607320.1	RFTN1-012	616	88aa	ENSP00000475367.1	Nonsense mediated decay		U3KPZ2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000453536.1	RFTN1-009	577	117aa	ENSP00000410493.1	Nonsense mediated decay		F8WAR1	-	-
ENST00000483671.1	RFTN1-003	1314	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495666.1	RFTN1-011	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470458.1	RFTN1-010	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484752.1	RFTN1-004	513	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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