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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CHMP2A ENSG00000130724

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Description

charged multivesicular body protein 2A [Source:HGNC Symbol;Acc:30216]

Gene Synonyms

BC-2, BC2, CHMP2, VPS2, VPS2A

Location

Chromosome 19: 59,062,933-59,066,491 reverse strand.

GRCh37:CM000681.1

About this gene

This gene has 8 transcripts (splice variants), 196 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000600118.1	CHMP2A-003	1178	222aa	ENSP00000469240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12986	M0QXX8 M0R1L7 O43633	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000312547.2	CHMP2A-001	913	222aa	ENSP00000310440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12986	M0QXX8 M0R1L7 O43633	NM_014453.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000601220.1	CHMP2A-004	885	222aa	ENSP00000472680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12986	M0QXX8 M0R1L7 O43633	NM_198426.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000600006.1	CHMP2A-009	766	227aa	ENSP00000472097.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000596708.1	CHMP2A-007	687	159aa	ENSP00000471961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXX8 M0R1L7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000597848.1	CHMP2A-006	509	55aa	ENSP00000469453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXX8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000597209.1	CHMP2A-008	662	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000600804.1	CHMP2A-005	592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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