Description
calponin 1, basic, smooth muscle [Source:HGNC Symbol;Acc:2155]
Gene Synonyms
HEL-S-14, SMCC, Sm-Calp
Location
Chromosome 19: 11,649,532-11,661,138 forward strand.
GRCh37:CM000681.1
About this gene
This gene has 11 transcripts (splice variants), 219 orthologues and 5 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000252456.2 | CNN1-001 | 1633 | 297aa | ENSP00000252456.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12263 | B7Z7E1 K7ENC5 P51911 | NM_001299.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000592923.1 | CNN1-002 | 1848 | 247aa | ENSP00000468259.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z7E1 K7ENC5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000535659.2 | CNN1-003 | 1527 | 247aa | ENSP00000442031.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z7E1 K7ENC5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000544952.1 | CNN1-201 | 953 | 277aa | ENSP00000437470.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DUX6 B7Z7E1 K7ENC5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000588935.1 | CNN1-007 | 700 | 228aa | ENSP00000468053.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000586577.1 | CNN1-008 | 685 | 173aa | ENSP00000467701.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000586059.1 | CNN1-004 | 565 | 116aa | ENSP00000466886.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ENC5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000585869.1 | CNN1-005 | 549 | 119aa | ENSP00000468326.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ERM8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000592338.1 | CNN1-010 | 525 | 175aa | ENSP00000468293.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000587087.1 | CNN1-009 | 512 | 115aa | ENSP00000468737.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ESJ2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000588468.1 | CNN1-006 | 580 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
