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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ITFG1 ENSG00000129636

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Description

integrin alpha FG-GAP repeat containing 1 [Source:HGNC Symbol;Acc:30697]

Gene Synonyms

CDA08, TIP

Location

Chromosome 16: 47,188,298-47,498,060 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 12 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320640.6	ITFG1-001	3400	612aa	ENSP00000319918.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10728	B4DHQ9 B4DSA2 H3BQ64 Q8TB96	NM_030790.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000565940.2	ITFG1-003	2661	113aa	ENSP00000459192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQ64	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000544001.2	ITFG1-002	1849	464aa	ENSP00000441062.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXC5 H3BQ64	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000565262.1	ITFG1-010	584	178aa	ENSP00000457665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BUJ1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000563730.1	ITFG1-012	550	73aa	ENSP00000455630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQ64	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568047.1	ITFG1-004	2636	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000542691.1	ITFG1-006	1464	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537184.2	ITFG1-011	1422	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563350.1	ITFG1-005	1006	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000564825.1	ITFG1-008	284	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567957.1	ITFG1-009	924	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569551.2	ITFG1-007	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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