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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HOXD3 ENSG00000128652

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Description

homeobox D3 [Source:HGNC Symbol;Acc:5137]

Gene Synonyms

HHO.C13, HOX-5.1, HOX1D, HOX4, HOX4A, HOX4B, Hox-4.1, Hox-4.2

Location

Chromosome 2: 177,001,340-177,037,830 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 5 transcripts (splice variants), 192 orthologues and 42 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000468418.3	HOXD3-005	4212	432aa	ENSP00000424734.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2270	C9J1M3 P31249	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000410016.1	HOXD3-004	2384	432aa	ENSP00000386498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2270	C9J1M3 P31249	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000249440.3	HOXD3-001	2303	432aa	ENSP00000249440.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2270	C9J1M3 P31249	NM_006898.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000432796.2	HOXD3-002	428	100aa	ENSP00000392615.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1M3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000459979.2	HOXD3-003	1055	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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