Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SYNGR3 ENSG00000127561

.

Description

synaptogyrin 3 [Source:HGNC Symbol;Acc:11501]

Location

Chromosome 16: 2,039,661-2,044,276 forward strand.

GRCh37:CM000678.1

About this gene

This gene has 5 transcripts (splice variants), 253 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000248121.2	SYNGR3-001	2051	229aa	ENSP00000248121.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10456	O43761	NM_004209.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000562045.1	SYNGR3-005	1743	76aa	ENSP00000455577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQ28	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000563869.1	SYNGR3-003	860	239aa	ENSP00000455344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPJ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568896.1	SYNGR3-004	533	177aa	ENSP00000454756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNA6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000564642.1	SYNGR3-006	752	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Summary

.

.