Description
thyroid hormone receptor, alpha [Source:HGNC Symbol;Acc:11796]
Gene Synonyms
AR7, CHNG6, EAR-7.1/EAR-7.2, EAR7, ERB-T-1, ERBA, ERBA1, NR1A1, THRA1, THRA2, THRA3, c-ERBA-1
Location
Chromosome 17: 38,214,543-38,250,120 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 10 transcripts (splice variants), 391 orthologues, 18 paralogues and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000264637.4 | THRA-001 | 2538 | 490aa | ENSP00000264637.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11360 | J3KTF3 J3QR26 J3QRA9 J3QRW5 P10827 | NM_003250.5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000450525.2 | THRA-002 | 4895 | 410aa | ENSP00000395641.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42316 | J3KTF3 J3QR26 J3QRA9 J3QRW5 P10827 Q6FH41 Q6LDR0 | NM_199334.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000584985.1 | THRA-005 | 2421 | 451aa | ENSP00000463466.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58546 | J3KTF3 J3QR26 J3QRA9 J3QRW5 P10827 | NM_001190918.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000394121.4 | THRA-003 | 2260 | 490aa | ENSP00000377679.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11360 | J3KTF3 J3QR26 J3QRA9 J3QRW5 P10827 | NM_001190919.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000546243.1 | THRA-006 | 1909 | 410aa | ENSP00000443972.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42316 | J3KTF3 J3QR26 J3QRA9 J3QRW5 P10827 Q6FH41 Q6LDR0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000578218.1 | THRA-009 | 907 | 84aa | ENSP00000464123.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KTF3 J3QR26 J3QRA9 J3QRW5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000577288.1 | THRA-007 | 581 | 31aa | ENSP00000464013.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QR26 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000585047.1 | THRA-008 | 574 | 72aa | ENSP00000462955.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KTF3 J3QR26 J3QRW5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000577486.1 | THRA-010 | 563 | 57aa | ENSP00000464414.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QR26 J3QRW5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000577637.1 | THRA-011 | 677 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
