Description
ERGIC and golgi 3 [Source:HGNC Symbol;Acc:15927]
Gene Synonyms
C20orf47, CGI-54, ERV46, Erv46, NY-BR-84, PRO0989, SDBCAG84, dJ477O4.2
Location
Chromosome 20: 34,129,770-34,145,405 forward strand.
GRCh37:CM000682.1
About this gene
This gene has 21 transcripts (splice variants), 212 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000357394.4 | ERGIC3-003 | 1357 | 388aa | ENSP00000349970.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13258 | Q9Y282 | NM_198398.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000348547.2 | ERGIC3-001 | 1359 | 383aa | ENSP00000341358.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13257 | A2TJK5 Q9Y282 | NM_015966.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000447986.1 | ERGIC3-202 | 1343 | 398aa | ENSP00000392341.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PFA8 Q5JWS0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000279052.6 | ERGIC3-201 | 1313 | 388aa | ENSP00000279052.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7BXI5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000416206.1 | ERGIC3-006 | 1235 | 397aa | ENSP00000399124.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JWS0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000413587.1 | ERGIC3-017 | 977 | 326aa | ENSP00000402480.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVJ3 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000411577.1 | ERGIC3-011 | 601 | 118aa | ENSP00000414490.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVJ2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000451605.1 | ERGIC3-015 | 520 | 130aa | ENSP00000416402.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JWS1 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000442139.1 | ERGIC3-008 | 472 | 157aa | ENSP00000408840.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JWS2 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000438317.1 | ERGIC3-010 | 590 | 123aa | ENSP00000389398.1 | Nonsense mediated decay | - | - | - | |
| ENST00000482338.1 | ERGIC3-014 | 598 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000486268.1 | ERGIC3-018 | 584 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000489071.1 | ERGIC3-019 | 582 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000488935.1 | ERGIC3-009 | 389 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000492184.1 | ERGIC3-005 | 2848 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476926.1 | ERGIC3-004 | 1633 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000496172.1 | ERGIC3-013 | 781 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000488384.1 | ERGIC3-016 | 766 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461043.2 | ERGIC3-012 | 728 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000475211.1 | ERGIC3-021 | 514 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000465298.1 | ERGIC3-020 | 505 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
