Description
RALY heterogeneous nuclear ribonucleoprotein [Source:HGNC Symbol;Acc:15921]
Gene Synonyms
HNRPCL2, P542
Location
Chromosome 20: 32,581,452-32,696,114 forward strand.
GRCh37:CM000682.1
About this gene
This gene has 10 transcripts (splice variants), 204 orthologues and 6 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000246194.3 | RALY-002 | 1789 | 306aa | ENSP00000246194.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13230 | B4DSJ1 Q53GL6 Q5QPM1 Q5QPM2 Q9UKM9 | NM_016732.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000375114.3 | RALY-001 | 1817 | 290aa | ENSP00000364255.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13229 | Q5QPL9 Q5QPM2 Q9UKM9 | NM_007367.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000448364.1 | RALY-004 | 1204 | 181aa | ENSP00000413638.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DSJ1 Q5QPM1 Q5QPM2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000442805.1 | RALY-007 | 871 | 237aa | ENSP00000415973.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5QPL9 Q5QPM2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000333552.5 | RALY-005 | 786 | 171aa | ENSP00000327522.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5QPM0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000413297.1 | RALY-003 | 766 | 89aa | ENSP00000403744.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5QPM2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000493399.1 | RALY-006 | 513 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000488227.1 | RALY-009 | 430 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000489384.1 | RALY-008 | 227 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481580.1 | RALY-010 | 773 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
