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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: AP5S1 ENSG00000125843

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Description

adaptor-related protein complex 5, sigma 1 subunit [Source:HGNC Symbol;Acc:15875]

Gene Synonyms

C20orf29, FLJ11168

Location

Chromosome 20: 3,801,178-3,805,949 forward strand.

GRCh37:CM000682.1

About this gene

This gene has 4 transcripts (splice variants) and 183 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000246041.2	AP5S1-001	1827	200aa	ENSP00000246041.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13070	A2A2L4 Q5JX74 Q9NUS5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000379573.2	AP5S1-003	1848	59aa	ENSP00000368892.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JX74	NM_018347.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000379567.2	AP5S1-004	1791	200aa	ENSP00000368886.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13070	A2A2L4 Q5JX74 Q9NUS5	NM_001204447.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000455742.1	AP5S1-002	584	86aa	ENSP00000405487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A2L4 Q5JX74	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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