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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SDCBP2 ENSG00000125775

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Description

syndecan binding protein (syntenin) 2 [Source:HGNC Symbol;Acc:15756]

Gene Synonyms

SITAC, SITAC18, ST-2

Location

Chromosome 20: 1,290,619-1,309,883 reverse strand.

GRCh37:CM000682.1

About this gene

This gene has 5 transcripts (splice variants), 205 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360779.3	SDCBP2-003	1519	292aa	ENSP00000354013.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42848	Q9H190	NM_080489.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381812.1	SDCBP2-001	1484	292aa	ENSP00000371233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42848	Q9H190	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000339987.3	SDCBP2-004	1404	292aa	ENSP00000342935.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42848	Q9H190	NM_001199784.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381808.3	SDCBP2-002	1295	207aa	ENSP00000371229.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13013	Q9H190	NM_015685.5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000467129.1	SDCBP2-005	803	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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