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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: IRF1 ENSG00000125347

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Description

interferon regulatory factor 1 [Source:HGNC Symbol;Acc:6116]

Gene Synonyms

IRF-1, MAR

Location

Chromosome 5: 131,817,301-131,826,490 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 10 transcripts (splice variants), 8 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000245414.4	IRF1-001	3579	325aa	ENSP00000245414.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4155	C9JD95 P10914 Q6FHN8 Q75MZ8 R4GNI0	NM_002198.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405885.2	IRF1-008	2061	325aa	ENSP00000384406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4155	C9JD95 P10914 Q6FHN8 Q75MZ8 R4GNI0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458069.1	IRF1-010	885	192aa	ENSP00000396318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JD95 R4GNI0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000437654.1	IRF1-002	832	198aa	ENSP00000405655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9C5 R4GNI0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476613.1	IRF1-007	523	118aa	ENSP00000473661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GNI0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000439555.2	IRF1-009	524	51aa	ENSP00000392455.1	Nonsense mediated decay		F8WCM1	-	-
ENST00000463784.1	IRF1-003	520	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472045.1	IRF1-006	5153	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459982.1	IRF1-004	1231	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493208.1	IRF1-005	1023	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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