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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PACSIN1 ENSG00000124507

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Description

protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:8570]

Gene Synonyms

KIAA1379, SDPI

Location

Chromosome 6: 34,433,916-34,503,006 forward strand.

GRCh37:CM000668.1

About this gene

This gene has 6 transcripts (splice variants), 272 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000538621.1	PACSIN1-201	4271	444aa	ENSP00000439639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4793	F6U236 Q5TZC3 Q9BY11	NM_001199583.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000244458.2	PACSIN1-001	4229	444aa	ENSP00000244458.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4793	F6U236 Q5TZC3 Q9BY11	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000374043.2	PACSIN1-003	4229	402aa	ENSP00000363155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6U236	NM_020804.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000486120.1	PACSIN1-005	855	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487760.1	PACSIN1-004	668	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493633.1	PACSIN1-002	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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