Description
hypoxia inducible factor 3, alpha subunit [Source:HGNC Symbol;Acc:15825]
Gene Synonyms
BHLHE17, HIF-3A, IPAS, MOP7, PASD7, bHLHe17
Location
Chromosome 19: 46,800,303-46,846,690 forward strand.
GRCh37:CM000681.1
About this gene
This gene has 21 transcripts (splice variants) and 14 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000339613.2 | HIF3A-201 | 5908 | 613aa | ENSP00000341877.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PB04 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000377670.4 | HIF3A-003 | 5852 | 669aa | ENSP00000366898.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12681 | E9PB04 O95262 Q9UPH7 Q9Y2N7 | NM_152795.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000300862.3 | HIF3A-006 | 2551 | 667aa | ENSP00000300862.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12682 | E9PB04 Q9UPH7 Q9Y2N7 | NM_152794.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000244303.6 | HIF3A-007 | 2250 | 600aa | ENSP00000244303.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42580 | Q9Y2N7 | NM_022462.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000600383.1 | HIF3A-023 | 2101 | 594aa | ENSP00000471560.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0R104 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000420102.2 | HIF3A-202 | 2101 | 612aa | ENSP00000407771.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H884 M0R104 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000472815.1 | HIF3A-004 | 1709 | 450aa | ENSP00000434653.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YDZ5 | NM_152796.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000533145.1 | HIF3A-012 | 573 | 148aa | ENSP00000435200.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLC8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000528563.1 | HIF3A-018 | 1486 | 69aa | ENSP00000435532.1 | Nonsense mediated decay | E9PJR0 | - | - | |
| ENST00000600879.1 | HIF3A-024 | 576 | 69aa | ENSP00000469031.1 | Nonsense mediated decay | E9PJR0 | - | - | |
| ENST00000533789.1 | HIF3A-010 | 562 | 81aa | ENSP00000432809.1 | Nonsense mediated decay | E9PNQ7 | - | - | |
| ENST00000531043.1 | HIF3A-016 | 544 | 93aa | ENSP00000434700.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000526506.1 | HIF3A-014 | 539 | 69aa | ENSP00000432613.1 | Nonsense mediated decay | E9PJR0 | - | - | |
| ENST00000525854.1 | HIF3A-013 | 767 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000244302.4 | HIF3A-001 | 2101 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000291300.4 | HIF3A-009 | 2101 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000475432.2 | HIF3A-002 | 2004 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000529542.1 | HIF3A-017 | 1031 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000529205.1 | HIF3A-015 | 549 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000524533.1 | HIF3A-011 | 507 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000600236.1 | HIF3A-008 | 313 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
