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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CHD6 ENSG00000124177

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Description

chromodomain helicase DNA binding protein 6 [Source:HGNC Symbol;Acc:19057]

Gene Synonyms

CHD-6, CHD5, FLJ22369, KIAA1335, RIGB, dJ620E11.1

Location

Chromosome 20: 40,030,741-40,247,133 reverse strand.

GRCh37:CM000682.1

About this gene

This gene has 9 transcripts (splice variants), 192 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373233.3	CHD6-001	10818	2715aa	ENSP00000362330.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13317	Q8TD26	NM_032221.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000309279.7	CHD6-201	2647	822aa	ENSP00000308684.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFU2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000373222.3	CHD6-006	2477	373aa	ENSP00000362319.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TD26	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000440697.1	CHD6-002	1635	525aa	ENSP00000404637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000440647.1	CHD6-008	536	149aa	ENSP00000392503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480022.1	CHD6-003	2829	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470470.1	CHD6-005	1349	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476641.1	CHD6-004	852	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482596.1	CHD6-007	599	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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