Description
solute carrier family 12 (potassium/chloride transporter), member 4 [Source:HGNC Symbol;Acc:10913]
Gene Synonyms
KCC1
Location
Chromosome 16: 67,977,377-68,003,504 reverse strand.
GRCh37:CM000678.1
About this gene
This gene has 20 transcripts (splice variants), 215 orthologues and 8 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000422611.2 | SLC12A4-202 | 4670 | 1087aa | ENSP00000395983.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54032 | I3L4N6 J3QRE2 Q9UP95 | NM_001145962.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000316341.3 | SLC12A4-001 | 3911 | 1085aa | ENSP00000318557.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10855 | J3QRE2 Q9UP95 | NM_005072.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000576616.1 | SLC12A4-017 | 3768 | 1068aa | ENSP00000458902.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QRE2 Q9UP95 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000338335.3 | SLC12A4-201 | 3644 | 780aa | ENSP00000343374.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QRE2 Q9UP95 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000541864.2 | SLC12A4-004 | 3627 | 1054aa | ENSP00000438334.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54031 | J3QRE2 Q9UP95 | NM_001145964.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000572037.1 | SLC12A4-007 | 3620 | 1037aa | ENSP00000461403.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L4N6 J3QRE2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000537830.2 | SLC12A4-005 | 3525 | 1079aa | ENSP00000445962.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54030 | J3QRE2 Q9UP95 | NM_001145963.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000571299.1 | SLC12A4-008 | 891 | 178aa | ENSP00000464168.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QRE2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000576377.1 | SLC12A4-010 | 868 | 54aa | ENSP00000458975.1 | Nonsense mediated decay | I3L1N8 | - | - | |
| ENST00000575857.2 | SLC12A4-014 | 591 | 91aa | ENSP00000464660.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000570616.1 | SLC12A4-020 | 406 | 19aa | ENSP00000463148.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000572010.1 | SLC12A4-003 | 1016 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000570802.1 | SLC12A4-018 | 3761 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000573023.2 | SLC12A4-002 | 3649 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000574665.1 | SLC12A4-012 | 847 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000576462.1 | SLC12A4-009 | 673 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000573702.1 | SLC12A4-015 | 633 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000572476.1 | SLC12A4-013 | 573 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000572766.2 | SLC12A4-011 | 515 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000576513.2 | SLC12A4-016 | 412 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
