Description
GIPC PDZ domain containing family, member 1 [Source:HGNC Symbol;Acc:1226]
Gene Synonyms
C19orf3, GIPC, GLUT1CBP, Hs.6454, IIP-1, NIP, RGS19IP1, SEMCAP, SYNECTIIN, SYNECTIN, TIP-2
Location
Chromosome 19: 14,588,572-14,606,944 reverse strand.
GRCh37:CM000681.1
About this gene
This gene has 14 transcripts (splice variants), 191 orthologues, 2 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000393033.4 | GIPC1-001 | 1926 | 333aa | ENSP00000376753.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12310 | K7EIT0 K7ELJ2 K7ESN1 O14908 | NM_005716.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000345425.2 | GIPC1-007 | 1782 | 333aa | ENSP00000340698.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12310 | K7EIT0 K7ELJ2 K7ESN1 O14908 | NM_202470.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000393029.3 | GIPC1-202 | 1610 | 236aa | ENSP00000376749.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12311 | K7EIT0 K7ESN1 O14908 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000393028.1 | GIPC1-201 | 1466 | 236aa | ENSP00000376748.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12311 | K7EIT0 K7ESN1 O14908 | NM_202494.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000586027.1 | GIPC1-005 | 1386 | 333aa | ENSP00000466747.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12310 | K7EIT0 K7ELJ2 K7ESN1 O14908 | NM_202468.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000591349.1 | GIPC1-006 | 1068 | 236aa | ENSP00000467077.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12311 | K7EIT0 K7ESN1 O14908 | NM_202469.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000589631.1 | GIPC1-012 | 799 | 128aa | ENSP00000466312.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EM11 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000587210.1 | GIPC1-008 | 576 | 159aa | ENSP00000468787.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EIT0 K7ESN1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000587969.1 | GIPC1-004 | 484 | 121aa | ENSP00000464879.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EIT0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000587934.1 | GIPC1-009 | 330 | 40aa | ENSP00000466624.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ELJ2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000591245.1 | GIPC1-011 | 265 | 40aa | ENSP00000466105.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ELJ2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000589497.1 | GIPC1-010 | 853 | 62aa | ENSP00000465003.1 | Nonsense mediated decay | K7EJ33 | - | - | |
| ENST00000585606.1 | GIPC1-002 | 2071 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000587811.1 | GIPC1-003 | 1717 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
