Description
caldesmon 1 [Source:HGNC Symbol;Acc:1441]
Gene Synonyms
CAD, CDM, H-CAD, HCAD, L-CAD, LCAD, NAG22
Location
Chromosome 7: 134,429,003-134,655,479 forward strand.
GRCh37:CM000669.1
About this gene
This gene has 26 transcripts (splice variants), 237 orthologues and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000361675.2 | CALD1-005 | 3612 | 793aa | ENSP00000354826.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5835 | B4E3I0 C9JE79 Q05682 Q7Z2Y9 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000361388.2 | CALD1-201 | 4544 | 564aa | ENSP00000355000.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E3I0 C9JE79 Q05682 Q7Z2Y9 | NM_033157.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000393118.2 | CALD1-202 | 4281 | 558aa | ENSP00000376826.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47716 | B4E3I0 Q05682 Q7Z2Y9 | NM_033140.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000361901.2 | CALD1-001 | 4114 | 538aa | ENSP00000354513.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5834 | B4E3I0 C9J813 C9JE79 Q05682 Q7Z2Y9 | NM_004342.6 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000422748.1 | CALD1-003 | 2665 | 563aa | ENSP00000395710.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5836 | C9JE79 Q05682 Q7Z2Y9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000495522.1 | CALD1-029 | 2199 | 557aa | ENSP00000419673.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EX44 Q7Z2Y9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000424922.1 | CALD1-010 | 2124 | 532aa | ENSP00000393621.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47717 | B4E3I0 Q05682 Q7Z2Y9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000543443.1 | CALD1-203 | 1978 | 543aa | ENSP00000445641.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E3I0 F5H1Z9 Q7Z2Y9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000417172.1 | CALD1-002 | 1915 | 538aa | ENSP00000398826.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5834 | B4E3I0 C9J813 C9JE79 Q05682 Q7Z2Y9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000436461.2 | CALD1-012 | 1614 | 459aa | ENSP00000411476.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J813 C9JE79 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000454108.1 | CALD1-017 | 558 | 72aa | ENSP00000401988.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JE79 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000445569.2 | CALD1-027 | 525 | 132aa | ENSP00000390926.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEK3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000435928.1 | CALD1-020 | 458 | 72aa | ENSP00000416611.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JE79 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000443197.1 | CALD1-009 | 4173 | 536aa | ENSP00000407522.1 | Nonsense mediated decay | E9PGZ1 | - | - | |
| ENST00000430085.1 | CALD1-004 | 1938 | 85aa | ENSP00000394715.1 | Nonsense mediated decay | F8WE61 | - | - | |
| ENST00000466704.1 | CALD1-015 | 903 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496024.1 | CALD1-021 | 557 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000489019.2 | CALD1-026 | 422 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000478075.1 | CALD1-023 | 193 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000462181.1 | CALD1-016 | 188 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000482470.1 | CALD1-008 | 3941 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000475772.1 | CALD1-019 | 753 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000472096.1 | CALD1-024 | 651 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000480638.1 | CALD1-028 | 560 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000498254.1 | CALD1-018 | 443 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000473714.1 | CALD1-025 | 230 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
