Description
coiled-coil domain containing 53 [Source:HGNC Symbol;Acc:24256]
Gene Synonyms
CGI-116
Location
Chromosome 12: 102,406,705-102,455,927 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 13 transcripts (splice variants) and 213 orthologues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000240079.6 | CCDC53-001 | 916 | 194aa | ENSP00000240079.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44959 | F5H0A7 Q9Y3C0 | NM_016053.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000545679.1 | CCDC53-002 | 865 | 193aa | ENSP00000443857.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ97 F5H0A7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000542923.1 | CCDC53-012 | 477 | 107aa | ENSP00000443922.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YGN0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000544341.1 | CCDC53-003 | 945 | 173aa | ENSP00000440134.1 | Nonsense mediated decay | F5GXZ7 F5H0A7 | - | - | |
| ENST00000535501.1 | CCDC53-004 | 921 | 61aa | ENSP00000440139.1 | Nonsense mediated decay | F5GXZ4 F5H0A7 | - | - | |
| ENST00000538761.1 | CCDC53-010 | 886 | 50aa | ENSP00000438122.1 | Nonsense mediated decay | F5H0A7 | - | - | |
| ENST00000540536.1 | CCDC53-007 | 883 | 169aa | ENSP00000441810.1 | Nonsense mediated decay | F5GWI9 F5H0A7 | - | - | |
| ENST00000500685.2 | CCDC53-006 | 588 | 77aa | ENSP00000445501.1 | Nonsense mediated decay | F5H0A7 F5H2P1 | - | - | |
| ENST00000539515.1 | CCDC53-005 | 688 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000536930.1 | CCDC53-011 | 289 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000536197.1 | CCDC53-013 | 879 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000326351.7 | CCDC53-008 | 843 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000541569.1 | CCDC53-009 | 569 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
