Gene: KDM3B ENSG00000120733

Description

lysine (K)-specific demethylase 3B [Source:HGNC Symbol;Acc:1337]

Gene Synonyms

5qNCA, C5orf7, JHDM2B, JMJD1B, KIAA1082, NET22

Location

Chromosome 5: 137,688,285-137,772,717 forward strand.

GRCh37:CM000667.1

About this gene

This gene has 10 transcripts (splice variants), 212 orthologues, 3 paralogues and is associated with 3 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000314358.5	KDM3B-001	6813	1761aa	ENSP00000326563.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34242	F5H275 Q7LBC6	NM_016604.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000394866.1	KDM3B-201	5581	1417aa	ENSP00000378335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H275 Q7LBC6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000542866.1	KDM3B-202	3034	793aa	ENSP00000439462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H275	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000510866.1	KDM3B-002	6324	274aa	ENSP00000425186.1	Nonsense mediated decay		H0Y9V5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000507996.1	KDM3B-004	3034	20aa	ENSP00000423012.1	Nonsense mediated decay		H0Y946	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508386.1	KDM3B-009	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505756.1	KDM3B-007	654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512928.1	KDM3B-005	627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509468.1	KDM3B-008	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504095.1	KDM3B-006	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: KDM3B ENSG00000120733

Summary