Description
t-complex 1 [Source:HGNC Symbol;Acc:11655]
Gene Synonyms
ACA29, CCT-alpha, CCT1, CCTA, CCTa, Ccta, D6S230E, TCP-1-alpha
Location
Chromosome 6: 160,199,530-160,210,781 reverse strand.
GRCh37:CM000668.1
About this gene
This gene has 18 transcripts (splice variants), 219 orthologues and 13 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000321394.7 | TCP1-001 | 2499 | 556aa | ENSP00000317334.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5269 | E7EQR6 F5H136 F5H282 F5H676 F5H726 P17987 | NM_030752.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000392168.2 | TCP1-004 | 1878 | 401aa | ENSP00000376008.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43522 | E7EQR6 F5H282 | NM_001008897.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000420894.2 | TCP1-006 | 1671 | 433aa | ENSP00000390159.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ERF2 F5H136 F5H676 F5H726 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000544255.1 | TCP1-005 | 1403 | 332aa | ENSP00000439447.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H282 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000539756.1 | TCP1-011 | 780 | 221aa | ENSP00000441345.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ03 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539948.1 | TCP1-015 | 706 | 136aa | ENSP00000439671.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H136 F5H676 F5H726 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000537390.1 | TCP1-007 | 691 | 111aa | ENSP00000437840.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H676 F5H726 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000538128.1 | TCP1-008 | 557 | 59aa | ENSP00000442185.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H7Y1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000536394.1 | TCP1-014 | 535 | 91aa | ENSP00000442856.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H726 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000538530.1 | TCP1-012 | 918 | 65aa | ENSP00000440617.1 | Nonsense mediated decay | F5GYL4 | - | - | |
| ENST00000543517.1 | TCP1-010 | 561 | 100aa | ENSP00000444423.1 | Nonsense mediated decay | F5GZI8 | - | - | |
| ENST00000546023.1 | TCP1-003 | 1135 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000543532.1 | TCP1-009 | 561 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000536807.1 | TCP1-017 | 873 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000545764.1 | TCP1-016 | 709 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000467544.2 | TCP1-002 | 658 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000536607.1 | TCP1-013 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000546204.1 | TCP1-018 | 566 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
