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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SEC16B ENSG00000120341

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Description

SEC16 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:30301]

Gene Synonyms

KIAA1928, LZTR2, PGPR-p117, RGPR, SEC16S

Location

Chromosome 1: 177,893,091-177,953,438 reverse strand.

GRCh37:CM000663.1

About this gene

This gene has 8 transcripts (splice variants), 169 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308284.6	SEC16B-004	3985	1060aa	ENSP00000308339.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44281	Q96JE7	NM_033127.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000464631.2	SEC16B-003	2948	625aa	ENSP00000431727.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000527976.1	SEC16B-010	525	175aa	ENSP00000435101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000528461.1	SEC16B-013	3277	316aa	ENSP00000475522.1	Nonsense mediated decay		U3KQ39	-	-
ENST00000495165.1	SEC16B-006	2643	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000327037.4	SEC16B-005	1807	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000441371.1	SEC16B-012	811	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526773.2	SEC16B-011	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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