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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: FCF1 ENSG00000119616

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Description

FCF1 rRNA-processing protein [Source:HGNC Symbol;Acc:20220]

Gene Synonyms

Bka, C14orf111, CGI-35, UTP24

Location

Chromosome 14: 75,179,847-75,203,394 forward strand.

GRCh37:CM000676.1

About this gene

This gene has 8 transcripts (splice variants), 214 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000341162.4	FCF1-001	2412	198aa	ENSP00000344393.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9832	G3V1S4 G3V2M5 Q4FZ45 Q66K47 Q9Y324	NM_015962.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000553615.1	FCF1-003	954	183aa	ENSP00000452497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2M5 G3V5S9 Q66K47	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000534938.2	FCF1-007	794	186aa	ENSP00000444939.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1S4 G3V2M5 Q66K47	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000554590.1	FCF1-002	574	61aa	ENSP00000450750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2M5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554064.1	FCF1-008	605	52aa	ENSP00000452415.1	Nonsense mediated decay		G3V5D2 G3V5L8	-	-
ENST00000556814.1	FCF1-006	571	65aa	ENSP00000451345.1	Nonsense mediated decay		G3V3N8	-	-
ENST00000553673.1	FCF1-009	547	40aa	ENSP00000452297.1	Nonsense mediated decay		G3V5D2	-	-
ENST00000554973.1	FCF1-010	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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