Description
polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:10253]
Gene Synonyms
DKFZp781I1117, ROD1
Location
Chromosome 9: 114,980,715-115,095,947 reverse strand.
GRCh37:CM000671.1
About this gene
This gene has 8 transcripts (splice variants), 203 orthologues and 5 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000458258.1 | PTBP3-202 | 7093 | 558aa | ENSP00000414921.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59141 | O95758 | NM_001244898.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000334318.6 | PTBP3-201 | 7271 | 555aa | ENSP00000334499.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55333 | B1ALY4 O95758 | NM_005156.6 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000374257.1 | PTBP3-004 | 7240 | 524aa | ENSP00000363375.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55332 | O95758 | NM_001244897.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000374255.2 | PTBP3-006 | 3413 | 552aa | ENSP00000363373.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6784 | O95758 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000343327.2 | PTBP3-005 | 2755 | 457aa | ENSP00000340705.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59140 | O95758 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000210227.4 | PTBP3-001 | 734 | 182aa | ENSP00000210227.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000450374.1 | PTBP3-003 | 368 | 77aa | ENSP00000388024.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B1ALY4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000487997.1 | PTBP3-002 | 389 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
