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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CASC1 ENSG00000118307

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Description

cancer susceptibility candidate 1 [Source:HGNC Symbol;Acc:29599]

Gene Synonyms

FLJ10921, LAS1, PPP1R54

Location

Chromosome 12: 25,261,354-25,348,096 reverse strand.

GRCh37:CM000674.1

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354189.5	CASC1-004	2445	690aa	ENSP00000346126.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41763	F5H555 G3V3G6 Q6TDU7	NM_001082972.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395990.2	CASC1-002	2417	676aa	ENSP00000379313.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55810	G3V3G6 Q6TDU7	NM_001204102.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395987.3	CASC1-003	2363	722aa	ENSP00000379310.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31759	F8W8F9 G3V3G6	NM_018272.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000320267.9	CASC1-001	2361	716aa	ENSP00000313141.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41762	B4DY27 G3V3G6 Q6TDU7	NM_001082973.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537577.1	CASC1-201	2208	514aa	ENSP00000444715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H555	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545133.1	CASC1-009	2146	657aa	ENSP00000437373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55811	Q6TDU7	NM_001204101.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556006.2	CASC1-010	1774	548aa	ENSP00000451813.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3G6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554347.1	CASC1-013	583	92aa	ENSP00000451232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3G6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554533.1	CASC1-005	2208	35aa	ENSP00000450703.1	Nonsense mediated decay		G3V2J3	-	-
ENST00000556467.1	CASC1-011	563	45aa	ENSP00000451011.1	Nonsense mediated decay		G3V333	-	-
ENST00000557684.1	CASC1-008	1626	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555554.1	CASC1-014	403	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556547.1	CASC1-012	820	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555240.1	CASC1-007	467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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