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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TSPAN1 ENSG00000117472

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Description

tetraspanin 1 [Source:HGNC Symbol;Acc:20657]

Gene Synonyms

NET-1, NET1, TM4C, TM4SF, TSPAN-1

Location

Chromosome 1: 46,640,745-46,651,630 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 9 transcripts (splice variants), 193 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372003.1	TSPAN1-001	1615	241aa	ENSP00000361072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS530	O60635	NM_005727.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000498443.1	TSPAN1-005	1071	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475163.1	TSPAN1-004	917	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469330.1	TSPAN1-003	890	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464786.1	TSPAN1-007	872	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482928.1	TSPAN1-002	844	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482143.1	TSPAN1-008	827	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470318.1	TSPAN1-010	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472170.1	TSPAN1-009	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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