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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SLAMF1 ENSG00000117090

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Description

signaling lymphocytic activation molecule family member 1 [Source:HGNC Symbol;Acc:10903]

Gene Synonyms

CD150, CDw150, SLAM

Location

Chromosome 1: 160,577,890-160,617,085 reverse strand.

GRCh37:CM000663.1

About this gene

This gene has 5 transcripts (splice variants), 101 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302035.6	SLAMF1-001	4006	335aa	ENSP00000306190.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1207	Q13291 Q9HBE7 Q9HBE8 Q9HBE9	NM_003037.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000235739.5	SLAMF1-201	1910	305aa	ENSP00000235739.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q13291 Q9HBE7 Q9HBE8 Q9HBE9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000355199.3	SLAMF1-202	1243	298aa	ENSP00000347333.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ET99 Q9HBE8 Q9HBE9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538290.1	SLAMF1-203	1021	269aa	ENSP00000438406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2E4 Q9HBE9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000494463.1	SLAMF1-003	671	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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