Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: MAP7D1 ENSG00000116871

.

Description

MAP7 domain containing 1 [Source:HGNC Symbol;Acc:25514]

Gene Synonyms

FLJ10350, FLJ39022, KIAA1187, PARCC1, RPRC1

Location

Chromosome 1: 36,621,180-36,646,450 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 13 transcripts (splice variants), 260 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373151.2	MAP7D1-009	3324	841aa	ENSP00000362244.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30673	C9JIR3 D3DPS3 E9PLH3 Q3KQU3	NM_018067.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000316156.4	MAP7D1-001	3456	803aa	ENSP00000320228.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65493	E9PLH3 Q3KQU3	NM_001286365.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000373150.4	MAP7D1-002	3238	808aa	ENSP00000362243.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65492	B3KU03 C9JIR3 E9PLH3 Q3KQU3	NM_001286366.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000373148.4	MAP7D1-003	1797	377aa	ENSP00000362241.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3KQU3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000429533.2	MAP7D1-005	959	244aa	ENSP00000390091.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIR3 E9PLH3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000530975.1	MAP7D1-015	744	248aa	ENSP00000437046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000530729.1	MAP7D1-010	567	140aa	ENSP00000435126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLH3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474796.1	MAP7D1-004	906	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487131.2	MAP7D1-013	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527764.1	MAP7D1-012	945	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487114.1	MAP7D1-006	890	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462118.1	MAP7D1-008	776	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532131.1	MAP7D1-014	771	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Summary

.

.