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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: EFCC1 ENSG00000114654

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Description

EF-hand and coiled-coil domain containing 1 [Source:HGNC Symbol;Acc:25692]

Gene Synonyms

C3orf73, CCDC48, FLJ12057

Location

Chromosome 3: 128,720,472-128,759,585 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 3 transcripts (splice variants), 86 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000480450.1	EFCC1-001	2689	598aa	ENSP00000420075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3054	Q9HA90	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000436022.2	EFCC1-201	2691	161aa	ENSP00000414597.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9HA90	NM_024768.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000481536.1	EFCC1-002	1963	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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