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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UPK1B ENSG00000114638

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Description

uroplakin 1B [Source:HGNC Symbol;Acc:12578]

Gene Synonyms

TSPAN20, UPIB, UPK1

Location

Chromosome 3: 118,892,364-118,924,000 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 5 transcripts (splice variants), 136 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264234.3	UPK1B-001	2118	260aa	ENSP00000264234.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2985	C9J027 C9J6N2 E7ETN9 O75841	NM_006952.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000460625.1	UPK1B-003	1937	252aa	ENSP00000418116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9M7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000497685.1	UPK1B-002	981	180aa	ENSP00000418972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ETN9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000479520.1	UPK1B-004	687	169aa	ENSP00000418399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6N2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494855.1	UPK1B-005	670	189aa	ENSP00000418597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J027 C9J6N2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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