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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: C3orf52 ENSG00000114529

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Description

chromosome 3 open reading frame 52 [Source:HGNC Symbol;Acc:26255]

Gene Synonyms

C3orf52, FLJ23186, TTMP

Location

Chromosome 3: 111,805,182-111,849,851 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 8 transcripts (splice variants) and 115 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000431717.2	C3orf52-202	2054	250aa	ENSP00000399392.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54620	Q5BVD1	NM_001171747.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000264848.5	C3orf52-001	2277	217aa	ENSP00000264848.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46887	Q5BVD1	NM_024616.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000484828.1	C3orf52-002	965	241aa	ENSP00000420077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000430855.1	C3orf52-201	517	147aa	ENSP00000390333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5BVD1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000480282.1	C3orf52-004	1080	147aa	ENSP00000420539.1	Nonsense mediated decay		Q5BVD1	-	-
ENST00000467942.2	C3orf52-003	3722	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494096.1	C3orf52-006	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497610.1	C3orf52-005	652	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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