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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: KPNA1 ENSG00000114030

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Description

karyopherin alpha 1 (importin alpha 5) [Source:HGNC Symbol;Acc:6394]

Gene Synonyms

IPOA5, NPI-1, RCH2, SRP1

Location

Chromosome 3: 122,140,796-122,233,792 reverse strand.

GRCh37:CM000665.1

About this gene

This gene has 10 transcripts (splice variants), 199 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000344337.6	KPNA1-001	6830	538aa	ENSP00000343701.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3013	B3KXZ2 C9J4U1 C9JWD9 C9JYI4 P52294	NM_002264.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000465882.1	KPNA1-006	1062	328aa	ENSP00000419890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4U1 C9JWD9 C9JYI4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482287.1	KPNA1-009	727	214aa	ENSP00000417166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4U1 C9JWD9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000493510.1	KPNA1-008	596	174aa	ENSP00000419257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWD9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476916.1	KPNA1-010	575	169aa	ENSP00000417319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J352	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494339.1	KPNA1-002	1923	182aa	ENSP00000418394.1	Nonsense mediated decay		F2Z3G4	-	-
ENST00000485027.1	KPNA1-003	1843	182aa	ENSP00000420013.1	Nonsense mediated decay		F2Z3G4	-	-
ENST00000466923.1	KPNA1-004	3316	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470904.1	KPNA1-005	3060	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464940.1	KPNA1-011	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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