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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SRSF9 ENSG00000111786

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Description

serine/arginine-rich splicing factor 9 [Source:HGNC Symbol;Acc:10791]

Gene Synonyms

15E1.2, SFRS9, SRP30C, SRp30c

Location

Chromosome 12: 120,899,471-120,907,596 reverse strand.

GRCh37:CM000674.1

About this gene

This gene has 6 transcripts (splice variants), 205 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000229390.3	SRSF9-001	1201	221aa	ENSP00000229390.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9199	Q13242	NM_003769.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000550458.1	SRSF9-005	327	109aa	ENSP00000449030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000603963.1	SRSF9-006	1043	119aa	ENSP00000474283.1	Nonsense mediated decay		S4R3G0	-	-
ENST00000548326.1	SRSF9-004	1704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548792.1	SRSF9-003	1446	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546942.1	SRSF9-002	946	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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