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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LPCAT3 ENSG00000111684

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Description

lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:30244]

Gene Synonyms

C3F, LPCAT, LPLAT 5, LPSAT, MBOAT5, OACT5, nessy

Location

Chromosome 12: 7,085,348-7,125,814 reverse strand.

GRCh37:CM000674.1

About this gene

This gene has 13 transcripts (splice variants), 202 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261407.4	LPCAT3-001	2268	487aa	ENSP00000261407.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8572	F5H0M4 Q6P1A2	NM_005768.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000535479.1	LPCAT3-003	2902	347aa	ENSP00000438765.1	Nonsense mediated decay		F5H0M4	-	-
ENST00000536797.1	LPCAT3-004	1412	198aa	ENSP00000440550.1	Nonsense mediated decay		F5GYT3	-	-
ENST00000543794.1	LPCAT3-005	1099	158aa	ENSP00000443166.1	Nonsense mediated decay		B7Z3N5	-	-
ENST00000540090.1	LPCAT3-006	974	85aa	ENSP00000442454.1	Nonsense mediated decay		F5H7K7	-	-
ENST00000538910.1	LPCAT3-008	571	64aa	ENSP00000437827.1	Nonsense mediated decay		F5H680	-	-
ENST00000535021.1	LPCAT3-011	802	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536971.1	LPCAT3-009	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000540060.1	LPCAT3-010	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000539868.1	LPCAT3-014	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545459.1	LPCAT3-013	486	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537179.1	LPCAT3-007	1135	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000538987.1	LPCAT3-012	527	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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