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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHPT1 ENSG00000111666

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Description

choline phosphotransferase 1 [Source:HGNC Symbol;Acc:17852]

Gene Synonyms

CPT, CPT1

Location

Chromosome 12: 102,090,725-102,137,918 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 10 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000549872.1	CHPT1-002	1989	398aa	ENSP00000448766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1B3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000229266.3	CHPT1-001	1585	406aa	ENSP00000229266.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9086	Q8WUD6	NM_020244.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552215.1	CHPT1-005	4342	184aa	ENSP00000448831.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000549128.1	CHPT1-004	1552	398aa	ENSP00000446994.1	Nonsense mediated decay		F8W1B3	-	-
ENST00000552351.1	CHPT1-003	1524	218aa	ENSP00000447887.1	Nonsense mediated decay		Q8WUD6	-	-
ENST00000546873.1	CHPT1-009	624	38aa	ENSP00000448369.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000552329.1	CHPT1-008	580	94aa	ENSP00000447920.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000550385.1	CHPT1-006	754	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000552213.1	CHPT1-010	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000546490.1	CHPT1-007	476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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