Description
chromodomain helicase DNA binding protein 4 [Source:HGNC Symbol;Acc:1919]
Gene Synonyms
Mi-2b, Mi2-BETA
Location
Chromosome 12: 6,679,249-6,716,642 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 15 transcripts (splice variants), 281 orthologues, 30 paralogues and is associated with 73 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000357008.2 | CHD4-202 | 6496 | 1912aa | ENSP00000349508.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8552 | F5H6N4 Q14839 | NM_001273.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000309577.6 | CHD4-201 | 6580 | 1940aa | ENSP00000312419.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6N4 Q14839 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000544484.1 | CHD4-013 | 6554 | 1937aa | ENSP00000440392.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q14839 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000544040.1 | CHD4-002 | 6514 | 1905aa | ENSP00000440542.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GWX5 F5H596 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000545942.1 | CHD4-003 | 1317 | 354aa | ENSP00000437506.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6N4 Q05CG6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000545584.1 | CHD4-004 | 553 | 125aa | ENSP00000444614.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H596 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000540960.1 | CHD4-001 | 892 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000535810.1 | CHD4-006 | 607 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000536999.1 | CHD4-007 | 318 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000542717.1 | CHD4-011 | 204 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000536301.1 | CHD4-010 | 107 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000537634.1 | CHD4-008 | 691 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000535717.1 | CHD4-012 | 660 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000430771.2 | CHD4-005 | 527 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000545083.1 | CHD4-009 | 511 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
