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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: C12orf49 ENSG00000111412

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Description

chromosome 12 open reading frame 49 [Source:HGNC Symbol;Acc:26128]

Gene Synonyms

FLJ21415

Location

Chromosome 12: 117,153,593-117,175,875 reverse strand.

GRCh37:CM000674.1

About this gene

This gene has 5 transcripts (splice variants) and 206 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261318.3	C12orf49-001	2801	205aa	ENSP00000261318.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9179	F8VVN2 Q9H741	NM_024738.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000548356.1	C12orf49-003	923	46aa	ENSP00000449151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VVN2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536380.1	C12orf49-201	911	175aa	ENSP00000442947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6Y2 F8VVN2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000547606.1	C12orf49-004	492	43aa	ENSP00000447722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000547630.1	C12orf49-002	1371	47aa	ENSP00000446478.1	Nonsense mediated decay		F8VPB4	-	-

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Summary

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