Description
lymphotoxin beta receptor (TNFR superfamily, member 3) [Source:HGNC Symbol;Acc:6718]
Gene Synonyms
CD18, D12S370, LT-BETA-R, TNF-R-III, TNFCR, TNFR-RP, TNFR2-RP, TNFR3, TNFRSF3
Location
Chromosome 12: 6,484,211-6,500,733 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 15 transcripts (splice variants) and 7 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000228918.4 | LTBR-001 | 2260 | 435aa | ENSP00000228918.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8544 | B3KTD9 P36941 Q75UT6 | NM_002342.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000539925.1 | LTBR-003 | 1665 | 416aa | ENSP00000440875.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59233 | B3KTD9 P36941 | NM_001270987.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541102.1 | LTBR-010 | 1084 | 292aa | ENSP00000438605.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H2E7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000536876.1 | LTBR-014 | 842 | 217aa | ENSP00000437647.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6F8 Q75UT6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543190.1 | LTBR-012 | 785 | 74aa | ENSP00000438955.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H1S5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000544454.1 | LTBR-006 | 632 | 148aa | ENSP00000437954.1 | Nonsense mediated decay | F5H627 | - | - | |
| ENST00000546296.1 | LTBR-004 | 783 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000541005.1 | LTBR-008 | 583 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000542830.1 | LTBR-005 | 539 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000543542.1 | LTBR-007 | 367 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000441074.2 | LTBR-009 | 2323 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000444814.2 | LTBR-002 | 1553 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000535739.1 | LTBR-013 | 928 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000440421.2 | LTBR-011 | 729 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000545445.1 | LTBR-015 | 379 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
