Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: PSMD9 ENSG00000110801

.

Description

proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 [Source:HGNC Symbol;Acc:9567]

Gene Synonyms

Rpn4, p27

Location

Chromosome 12: 122,326,637-122,356,203 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 12 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541212.1	PSMD9-003	2784	223aa	ENSP00000440485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9225	F5H182 O00233	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000261817.2	PSMD9-001	2307	222aa	ENSP00000261817.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KN29	NM_002813.5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000340175.5	PSMD9-201	741	207aa	ENSP00000340847.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W7V8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538613.1	PSMD9-005	534	153aa	ENSP00000443081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5V4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000542602.1	PSMD9-011	516	118aa	ENSP00000443772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58284	-	NM_001261400.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000535293.1	PSMD9-009	1773	128aa	ENSP00000443968.1	Nonsense mediated decay		F5H169	-	-
ENST00000537407.1	PSMD9-002	1195	209aa	ENSP00000445058.1	Nonsense mediated decay		F8W7V8 O00233	-	-
ENST00000543699.1	PSMD9-004	1001	179aa	ENSP00000440500.1	Nonsense mediated decay		F5GX23 F5H169 F5H5V4	-	-
ENST00000540962.1	PSMD9-006	793	85aa	ENSP00000442210.1	Nonsense mediated decay		F5H7X1	-	-
ENST00000544724.1	PSMD9-008	3051	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000361485.5	PSMD9-010	2087	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544254.1	PSMD9-007	1481	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Summary

.

.