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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC47 ENSG00000108588

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Description

coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:24856]

Gene Synonyms

GK001, MSTP041

Location

Chromosome 17: 61,822,610-61,853,711 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 6 transcripts (splice variants), 1 paralogue and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225726.5	CCDC47-001	3466	483aa	ENSP00000225726.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11643	Q96A33	NM_020198.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403162.3	CCDC47-002	2195	483aa	ENSP00000384888.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11643	Q96A33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000582252.1	CCDC47-003	1719	480aa	ENSP00000463577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96A33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580986.1	CCDC47-005	552	19aa	ENSP00000462202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000582331.2	CCDC47-006	693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000584112.1	CCDC47-007	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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