Description
Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:HGNC Symbol;Acc:17428]
Gene Synonyms
Link-GEFII
Location
Chromosome 17: 38,333,263-38,351,908 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 12 transcripts (splice variants), 194 orthologues and 24 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000436615.3 | RAPGEFL1-201 | 3727 | 456aa | ENSP00000408322.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11363 | F5GXC6 F5GY17 F5GYJ3 Q9UHV5 | NM_016339.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000264644.6 | RAPGEFL1-007 | 3429 | 456aa | ENSP00000264644.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11363 | F5GXC6 F5GY17 F5GYJ3 Q9UHV5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000544503.1 | RAPGEFL1-004 | 2079 | 505aa | ENSP00000438631.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXC6 F5GY17 F5GYJ3 F5H2D5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000456989.2 | RAPGEFL1-005 | 1582 | 511aa | ENSP00000394530.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXC6 F5GY17 F5GYJ3 Q9UHV5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000538981.1 | RAPGEFL1-008 | 779 | 101aa | ENSP00000441059.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXC6 F5GY17 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543876.1 | RAPGEFL1-011 | 560 | 149aa | ENSP00000440226.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXC6 F5GY17 F5GYJ3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000538884.1 | RAPGEFL1-006 | 540 | 20aa | ENSP00000440006.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GY17 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000541245.1 | RAPGEFL1-012 | 382 | 62aa | ENSP00000444646.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GY17 F5H582 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000540388.1 | RAPGEFL1-001 | 1743 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000545893.1 | RAPGEFL1-010 | 1527 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000469209.1 | RAPGEFL1-003 | 662 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000496032.1 | RAPGEFL1-002 | 528 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
