Description
upstream binding transcription factor, RNA polymerase I [Source:HGNC Symbol;Acc:12511]
Gene Synonyms
NOR-90, UBF, UBF-1, UBF1
Location
Chromosome 17: 42,282,401-42,298,994 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 14 transcripts (splice variants), 202 orthologues, 20 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000302904.4 | UBTF-002 | 4997 | 764aa | ENSP00000302640.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11480 | B4DLB0 E9PLT2 P17480 Q9BQR2 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000343638.5 | UBTF-001 | 4684 | 727aa | ENSP00000345297.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42346 | B4DLB0 E9PLT2 P17480 Q05BZ1 Q9BQR2 | NM_001076683.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000533177.1 | UBTF-006 | 3011 | 727aa | ENSP00000437180.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42346 | B4DLB0 E9PLT2 P17480 Q05BZ1 Q9BQR2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000527034.1 | UBTF-014 | 3010 | 745aa | ENSP00000431539.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKP7 E9PLT2 Q05BZ1 Q9BQR2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000436088.1 | UBTF-005 | 2738 | 764aa | ENSP00000390669.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11480 | B4DLB0 E9PLT2 P17480 Q9BQR2 | NM_014233.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000393606.3 | UBTF-004 | 2683 | 727aa | ENSP00000377231.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42346 | B4DLB0 E9PLT2 P17480 Q05BZ1 Q9BQR2 | NM_001076684.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000529383.1 | UBTF-008 | 2570 | 764aa | ENSP00000435708.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11480 | B4DLB0 E9PLT2 P17480 Q9BQR2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000526094.1 | UBTF-007 | 2459 | 727aa | ENSP00000432925.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42346 | B4DLB0 E9PLT2 P17480 Q05BZ1 Q9BQR2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000530828.1 | UBTF-009 | 721 | 149aa | ENSP00000433046.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PMM2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000529373.1 | UBTF-011 | 674 | 194aa | ENSP00000431295.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLT2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000529947.1 | UBTF-013 | 685 | 36aa | ENSP00000433625.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000537550.1 | UBTF-015 | 1085 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000529042.1 | UBTF-010 | 535 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000531368.1 | UBTF-012 | 431 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
