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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PKD2L1 ENSG00000107593

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Description

polycystic kidney disease 2-like 1 [Source:HGNC Symbol;Acc:9011]

Gene Synonyms

PCL, PKD2L, PKDL, TRPP3

Location

Chromosome 10: 102,047,903-102,090,243 reverse strand.

GRCh37:CM000672.1

About this gene

This gene has 6 transcripts (splice variants), 189 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318222.3	PKD2L1-001	3043	805aa	ENSP00000325296.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7492	Q9P0L9	NM_016112.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000353274.3	PKD2L1-202	2966	760aa	ENSP00000266049.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9P0L9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000338519.3	PKD2L1-201	2826	730aa	ENSP00000345068.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9P0L9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000465680.2	PKD2L1-002	423	62aa	ENSP00000434019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000528248.1	PKD2L1-004	2277	39aa	ENSP00000436514.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000532547.1	PKD2L1-003	554	71aa	ENSP00000434224.1	Nonsense mediated decay		E9PRD1	-	-

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Summary

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