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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LHX2 ENSG00000106689

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Description

LIM homeobox 2 [Source:HGNC Symbol;Acc:6594]

Gene Synonyms

LH-2, LH2, hLhx2

Location

Chromosome 9: 126,763,949-126,795,580 forward strand.

GRCh37:CM000671.1

About this gene

This gene has 4 transcripts (splice variants), 220 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373615.4	LHX2-001	2554	406aa	ENSP00000362717.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6853	P50458	NM_004789.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000446480.1	LHX2-002	1414	412aa	ENSP00000394978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000488674.2	LHX2-003	1266	115aa	ENSP00000476200.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000560961.1	LHX2-004	471	157aa	ENSP00000453448.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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