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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: MPP6 ENSG00000105926

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Description

membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) [Source:HGNC Symbol;Acc:18167]

Gene Synonyms

PALS2, VAM-1, VAM1, p55T

Location

Chromosome 7: 24,612,887-24,733,812 forward strand.

GRCh37:CM000669.1

About this gene

This gene has 8 transcripts (splice variants), 210 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000222644.5	MPP6-001	8452	540aa	ENSP00000222644.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5388	B8ZZG1 C9J4Q3 C9JGI8 Q9NZW5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000396475.2	MPP6-002	3848	540aa	ENSP00000379737.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5388	B8ZZG1 C9J4Q3 C9JGI8 Q9NZW5	NM_016447.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409761.1	MPP6-008	1703	428aa	ENSP00000386262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZG1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000430180.1	MPP6-006	1191	307aa	ENSP00000391020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4Q3 C9JGI8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432190.1	MPP6-004	982	217aa	ENSP00000395859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JGI8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000464384.2	MPP6-007	1125	64aa	ENSP00000473560.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000426450.1	MPP6-003	552	41aa	ENSP00000400515.1	Nonsense mediated decay		F8WCD2	-	-
ENST00000472674.1	MPP6-009	374	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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